bp_biogetseq.1p

Langue: en

Version: 2009-03-10 (debian - 07/07/09)

Section: 1 (Commandes utilisateur)

NAME

biogetseq - sequence retrieval using OBDA registry

DESCRIPTION

This script retrives sequences from the source defined by users registry setup. The current alternatives are from a local indexed file, sql database or over the web.

USAGE

   Usage: biogetseq --dbname embl --format embl
                    --namespace acc id [ ids... ]
          * dbname defaults to embl
          * format defaults to embl
          * namespace defaults to 'acc' ['id', 'acc', 'version']
          * unnamed arguments are ids in the given namespace