copymat

Langue: en

Autres versions - même langue

Version: 261883 (debian - 07/07/09)

Section: 1 (Commandes utilisateur)

Sommaire

NAME

copymat - convert ASCII matrices into a database suitable for quick reading

SYNOPSIS

copymat [-] [-H] [-P filename] [-W N] [-f X] [-r F]

DESCRIPTION

copymat converts ASCII matrices produced by makemat(1) into a database that can be read into memory quickly.

OPTIONS

A summary of options is included below.
-
Print usage message
-H
Print help; overrides all other arguments
-P filename
Database for matrix profiles (default = stdin)
-W N
Word size for RPS database (default = 3)
-f X
Threshold for extending hits for RPS database (default = 11.0)
-r F
Do not create RPS mem map file(s)

AUTHOR

The National Center for Biotechnology Information.

SEE ALSO

impala(1), makemat(1), /usr/share/doc/blast2/impala.html