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Bio::IdCollectionI.3pm
Langue: en
Version: 2009-02-27 (fedora - 05/07/09)
Section: 3 (Bibliothèques de fonctions)
NAME
Bio::IdCollectionI - interface for objects with multiple identifiersSYNOPSIS
# to test this is an identifiable collection object $obj->isa("Bio::IdCollectionI") || $obj->throw("$obj does not implement the Bio::IdCollectionI interface"); # accessors @authorities = $obj->id_authorities(); @ids = $obj->ids(); $id = $obj->ids($authority);
DESCRIPTION
This interface describes methods expected on objects that have multiple identifiers, each of which is controlled by a different authority.FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:
http://bugzilla.open-bio.org/
AUTHOR - Lincoln Stein
Email lstein@cshl.orgImplementation Specific Functions
These functions are the ones that a specific implementation must define.id_authorities
Title : id_authorities Usage : @array = $obj->id_authorities() Function: Return the authorities which have names for this object. The authorities can then be used to select ids. Returns : An array Status : Virtual
ids
Title : ids Usage : @ids = $obj->ids([$authority1,$authority2...]) Function: return a list of Bio::IdentifiableI objects, optionally filtered by the list of authorities. Returns : A list of Bio::IdentifiableI objects. Status : Virtual
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