Bio::LiveSeq::Intron.3pm

Langue: en

Version: 2009-03-10 (debian - 07/07/09)

Section: 3 (Bibliothèques de fonctions)

NAME

Bio::LiveSeq::Intron - Range abstract class for LiveSeq

SYNOPSIS

   # documentation needed
 
 

DESCRIPTION

Class for INTRON objects. They consist of a beginlabel, an endlabel (both referring to a LiveSeq DNA object) and a strand. The strand could be 1 (forward strand, default), -1 (reverse strand).

AUTHOR - Joseph A.L. Insana

Email: Insana@ebi.ac.uk, jinsana@gmx.net

APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

new

   Title   : new
   Usage   : $intron1=Bio::LiveSeq::Intron->new(-seq => $objref,
                                                -start => $startlabel,
                                                -end => $endlabel, 
                                                -strand => 1
                                                );
 
   Function: generates a new Bio::LiveSeq::Intron
   Returns : reference to a new object of class Intron
   Errorcode -1
   Args    : two labels and an integer