Bio::Graph::IO::dip.3pm

Langue: en

Version: 2008-01-11 (mandriva - 01/05/08)

Section: 3 (Bibliothèques de fonctions)

NAME

Bio::Graph::IO::dip - class for parsing interaction data in dip format

SYNOPSIS

Do not use this module directly, use Bio::Graph::IO, for example:
   my $graph_io = Bio::Graph::IO->new(-format => 'dip',
                                      -file   => 'data.dip');
 
 

METHODS

The naming system is analagous to the SeqIO system, although usually next_network() will be called only once per file.

next_network

   name        : next_network
   purpose     : parses a graph file and returns a Bio::Graph::ProteinGraph 
                 object
   usage       : my $g = $graph_io->next_network();
   arguments   : none
   returns     : a Bio::Graph::ProteinGraph object
 
 

write_network

  name     : write_network
  purpose  : write graph out in dip format
  arguments: a Bio::Graph::ProteinGraph object
  returns  : void
  usage    : $out->write_network($gr);