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Bio::Factory::MapFactoryI.3pm
Langue: en
Version: 2008-01-11 (mandriva - 01/05/08)
Section: 3 (Bibliothèques de fonctions)
NAME
Bio::Factory::MapFactoryI - A Factory for getting markersSYNOPSIS
# get a Map Factory somehow likely from Bio::MapIO system
while( my $map = $mapin->next_map ) { print "map name is ", $map->name, " length is ", $map->length, " ", $map->units, "\n"; $mapout->write_map($map); }
DESCRIPTION
This interface describes the necessary minimum methods for getting Maps from a data stream. It also supports writing Map data back to a stream.FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
http://bugzilla.open-bio.org/
AUTHOR - Jason Stajich
Email jason@bioperl.orgAPPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _next_map
Title : next_map Usage : my $map = $factory->next_map; Function: Get a map from the factory Returns : L<Bio::Map::MapI> Args : none
write_map
Title : write_map Usage : $factory->write_map($map); Function: Write a map out through the factory Returns : none Args : L<Bio::Map::MapI>
Contenus ©2006-2024 Benjamin Poulain
Design ©2006-2024 Maxime Vantorre