Langue: en

Version: 2010-05-19 (ubuntu - 24/10/10)

Section: 3 (Bibliothèques de fonctions)


Bio::SeqIO::exp - exp trace sequence input/output stream


Do not use this module directly. Use it via the Bio::SeqIO class.


This object can transform Bio::Seq objects to and from exp trace files.


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Please direct usage questions or support issues to the mailing list:

rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:

AUTHORS - Aaron Mackey



The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _


  Title   : next_seq
  Usage   : $seq = $stream->next_seq()
  Function: returns the next sequence in the stream
  Returns : Bio::Seq::Quality object
  Args    : NONE


  Title   : write_seq
  Usage   : $stream->write_seq(@seq)
  Function: writes the $seq object into the stream
  Returns : 1 for success and 0 for error
  Args    : Bio::Seq object